Syllabus For The Subject PRACTICAL VI - BIOLOGICAL DATABANKS AND SEQUENCE A

UNIT - 01

1.BIOLOGICAL DATABANKS SEQUENCE DATABASES, STRUCTURE DATABASES,

SPECIALIZED

DATABASES

2.DATA RETRIEVAL TOOLS AND METHODS DATABASE FILE FORMATS

3.MOLECULAR VISUALIZATION

4.GENE STRUCTURE AND FUNCTION PREDICTION (USING GENSCAN, GENEMARK)

5.SEQUENCE SIMILARITY SEARCHING (NCBI BLAST)

6.PROTEIN SEQUENCE ANALYSIS (EXPASY PROTEOMICS TOOLS)

7.MULTIPLE SEQUENCE ALIGNMENT (CLUSTAL)

8.MOLECULAR PHYLOGENY PHYLIP

9.ANALYSIS OF PROTEIN AND NUCLEIC ACIDS SEQUENCES

10.SEQUENCE ANALYSIS USING EMBOSS OR GCG WISCONSIN PACKAGE